RPubs in R

http://rpubs.com/

Register a free account

 

Publish to RPubs

1. Click “Knit HTML” to preview HTML result

2. Click “Publish” button (don’t forget to login RPubs in advance)

3. Type “Title” and “Description” of the document

4. A URL with identify ID has been generated

5. Can “Edit Details” or “Delete” the document

6. Click “Share” button to share the link to Twitter, Facebook or Google+

7. Check “Recently Published”

knitr in R

 

 

 

 

Source from: https://d396qusza40orc.cloudfront.net/repdata/slides/knitr.pdf

What is R Markdown?

 

 

knitr package: http://yihui.name/knitr/

markdown package: https://github.com/rstudio/markdown

slidify package: http://slidify.org/

 

Organizing a Data Analysis in R

R markdown: https://support.rstudio.com/hc/en-us/articles/200552086-Using-R-Markdown

https://github.com/jtleek/swfdr/blob/master/README

• Information about a non-reproducible study that led to cancer patients being mistreated: The Duke Saga Starter Set
• Reproducible research and Biostatistics
• Managing a statistical analysis project guidelines and best practices
• Project template - a pre-organized set of files for data analysis

Source from: http://datasciencespecialization.github.io/courses/05_ReproducibleResearch/organizingADataAnalysis/#1